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MAINT: replace q2-types-genomics with q2-types #8

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merged 1 commit into from
Feb 23, 2024
Merged

MAINT: replace q2-types-genomics with q2-types #8

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4 changes: 2 additions & 2 deletions q2_sourmash/_compute.py
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Original file line number Diff line number Diff line change
Expand Up @@ -14,9 +14,9 @@
import pandas as pd
import qiime2.util
from q2_types.per_sample_sequences import (
SingleLanePerSampleSingleEndFastqDirFmt
SingleLanePerSampleSingleEndFastqDirFmt,
MultiMAGSequencesDirFmt
)
from q2_types_genomics.per_sample_data import MultiMAGSequencesDirFmt

from q2_sourmash._format import MinHashSigJsonDirFormat

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2 changes: 1 addition & 1 deletion q2_sourmash/plugin_setup.py
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Expand Up @@ -9,7 +9,7 @@
from q2_types.distance_matrix import DistanceMatrix
from q2_types.per_sample_sequences import SequencesWithQuality
from q2_types.sample_data import SampleData
from q2_types_genomics.per_sample_data import MAGs
from q2_types.per_sample_sequences import MAGs
from qiime2.plugin import Plugin, Citations

from q2_sourmash._compare import compare
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