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PvSTATEM 0.1.0 #193

Merged
merged 13 commits into from
Oct 28, 2024
Merged

PvSTATEM 0.1.0 #193

merged 13 commits into from
Oct 28, 2024

Commits on Oct 22, 2024

  1. Show less of process_plate df (#191)

    * Remove extraneous column from RAU output
    
    * Limit the amount of dataframe presented in the vignettes
    ZetrextJG authored Oct 22, 2024
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Commits on Oct 24, 2024

  1. removed nplr warnings (#190)

    * Change warnings to message for handle_datetime
    
    * Fix warnings with bottom asymptote for plots
    
    * Manually handle values outside the asymptotes
    
    * Add test covering the warning
    ZetrextJG authored Oct 24, 2024
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  3. feat: additional notes in report (#192)

    * inital draft of notes
    
    * implement additional notes in template
    
    * implement in package code
    
    * tests and multiline support
    
    * improved docs and new test
    
    * typos fix
    
    * docs rerun
    nizwant authored Oct 24, 2024
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Commits on Oct 28, 2024

  1. vignettes and improvement of report (#196)

    * remove warnings from report and decrease dpi of thumbnails -1.5MB
    
    * reduce size by 50%
    
    * add dependency and rerun docs
    
    * reports vignettes init
    
    * text without images yet
    
    * improve vignettes but still with no photo
    
    * clean report vignette
    
    * upload pictures
    
    * correctly add photos
    
    * better handling of images and new notes photo
    
    * fixing grammar
    nizwant authored Oct 28, 2024
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  2. Style code (GHA)

    github-actions[bot] committed Oct 28, 2024
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  3. fix: consistency in filepaths (#197)

    * adjusted  file saving options to the  style
    
    * added a bit more description of the plate name
    
    * added `normalised_data` dir to .gitignore
    
    * helper function for validation the filepaths
    
    * updated vignettes and docs
    
    * updated the docs
    
    * fixed minor errors
    
    * adjusted tests
    
    * tests for `validate_filepath_and_output_dir`
    
    * raise the package version
    
    * examples fix
    
    * Update R/generate_report.R
    
    Co-authored-by: Jakub Grzywaczewski <[email protected]>
    
    * added proposed changes from both the reviews
    
    * added proposed changes from both the reviews
    
    Update R/generate_report.R
    
    Co-authored-by: Jakub Grzywaczewski <[email protected]># This is a combination of 2 commits.
    
    added proposed changes from both the reviews
    
    Update R/generate_report.R
    
    Co-authored-by: Jakub Grzywaczewski <[email protected]>
    
    * `tmp_dir` -> `example_dir`; fixed some descriptions in vignettes
    
    ---------
    
    Co-authored-by: Fersoil <Fersoil>
    Co-authored-by: Jakub Grzywaczewski <[email protected]>
    Fersoil and ZetrextJG authored Oct 28, 2024
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  6. Style code (GHA)

    github-actions[bot] committed Oct 28, 2024
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  8. news for 0.1.0 added (#199)

    nizwant authored Oct 28, 2024
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