Repositories list

• jDMRgrid

  Public
  jDMRgrid: a heuristic DMR caller for WGBS data using grid approach

  R

  •1•0•0•1•Updated Nov 13, 2024Nov 13, 2024

• GenomicLinks

  Public
  Jupyter Notebook

  •0•0•0•0•Updated May 8, 2024May 8, 2024

• gbMine

  Public
  Automatic detection of gene body methylated genes in plant genomes

  Python

  •0•0•0•0•Updated Feb 8, 2024Feb 8, 2024

• AlphaBeta

  Public
  Computational inference of epimutation rates and spectra from high-throughput DNA methylation data in plants

  geneticscomputational-biologyepigenetics

  R

  •

  GNU General Public License v3.0

  •2•10•1•1•Updated Jan 4, 2023Jan 4, 2023

• MethylStar

  Public
  A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.

  genomemethylationdna-methylation+ 3pipelinewgbsbismark

  Python

  •

  GNU General Public License v3.0

  •6•32•5•0•Updated Sep 24, 2021Sep 24, 2021

• Zhang-et-al-project

  Public
  R

  •1•0•0•0•Updated May 14, 2021May 14, 2021

• mutSOMA

  Public
  R

  •0•1•0•0•Updated Jul 11, 2019Jul 11, 2019

• Number-Sepration

  Public
  GNU General Public License v2.0

  •0•0•0•0•Updated Jan 15, 2014Jan 15, 2014