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Outlier Bio

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  1. ob-project-template ob-project-template Public

    Outlier Bio analysis project template

    Jupyter Notebook 54 15

  2. ob-pipelines ob-pipelines Public

    Luigi pipelines and Dockerized apps for bioinformatics and data science

    HTML 11 7

  3. bioit bioit Public

    Workflow toy example to accompany 2016 Bio-IT talk

    Python 4 3

  4. ob-genomics ob-genomics Public

    Genomics ETL, database, analysis, and visualization platform

    Python 2

  5. igv-server igv-server Public

    Dynamic IGV server linked to Airtable and S3

    Python 1

  6. ob-airtable ob-airtable Public

    Airtable python client

    Python 1

Repositories

Showing 10 of 12 repositories
  • ob-notebooks Public

    Computational notebook templates for common data analyses

    outlierbio/ob-notebooks’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated May 19, 2019
  • ob-genomics Public

    Genomics ETL, database, analysis, and visualization platform

    outlierbio/ob-genomics’s past year of commit activity
    Python 2 0 0 0 Updated Mar 15, 2019
  • ob-pipelines Public

    Luigi pipelines and Dockerized apps for bioinformatics and data science

    outlierbio/ob-pipelines’s past year of commit activity
    HTML 11 Apache-2.0 7 0 1 Updated Oct 2, 2018
  • ob-docker Public

    Docker images for bioinformatics notebook and app environments

    outlierbio/ob-docker’s past year of commit activity
    R 1 0 0 0 Updated Jun 30, 2018
  • ob-project-template Public

    Outlier Bio analysis project template

    outlierbio/ob-project-template’s past year of commit activity
    Jupyter Notebook 54 15 0 0 Updated Jan 29, 2018
  • luigi Public Forked from spotify/luigi

    Luigi is a Python module that helps you build complex pipelines of batch jobs. It handles dependency resolution, workflow management, visualization etc. It also comes with Hadoop support built in.

    outlierbio/luigi’s past year of commit activity
    Python 0 Apache-2.0 2,439 0 0 Updated Jan 2, 2018
  • s3wrap Public

    Use S3 URLs as arguments for any command-line tool

    outlierbio/s3wrap’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Dec 23, 2017
  • hail Public Forked from hail-is/hail

    Scalable genetic data analysis.

    outlierbio/hail’s past year of commit activity
    Scala 0 MIT 249 0 0 Updated Jul 9, 2017
  • ob-airtable Public

    Airtable python client

    outlierbio/ob-airtable’s past year of commit activity
    Python 1 0 0 0 Updated Jun 29, 2017
  • igv-server Public

    Dynamic IGV server linked to Airtable and S3

    outlierbio/igv-server’s past year of commit activity
    Python 1 MIT 0 0 0 Updated May 13, 2017
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