x1139 update amplification operation

cypress/e2e/pages/visiumQC.cy.ts

@@ -1,6 +1,10 @@
 import {
+  FindMeasurementByBarcodeAndNameQuery,
+  FindMeasurementByBarcodeAndNameQueryVariables,
   RecordOpWithSlotCommentsMutation,
   RecordOpWithSlotCommentsMutationVariables,
+  RecordOpWithSlotMeasurementsMutation,
+  RecordOpWithSlotMeasurementsMutationVariables,
   RecordVisiumQcMutation,
   RecordVisiumQcMutationVariables,
   SlideCosting
@@ -56,7 +60,7 @@ describe('Visium QC Page', () => {
         cy.findAllByTestId('passIcon').then(($passIcons) => {
           $passIcons.each((i, icon) => {
             const classList = Array.from(icon.classList);
-            expect(classList).to.includes('text-green-700');
+            expect(classList).includes('text-green-700');
           });
         });
       });
@@ -108,7 +112,7 @@ describe('Visium QC Page', () => {
         cy.findAllByTestId('passIcon').then(($passIcons) => {
           $passIcons.each((i, icon) => {
             const classList = Array.from(icon.classList);
-            expect(classList).to.includes('text-green-700');
+            expect(classList).includes('text-green-700');
           });
         });
       });
@@ -126,7 +130,7 @@ describe('Visium QC Page', () => {
         cy.findAllByTestId('failIcon').then(($failIcons) => {
           $failIcons.each((indx, failIcon) => {
             const classList = Array.from(failIcon.classList);
-            expect(classList).to.includes('text-red-700');
+            expect(classList).includes('text-red-700');
           });
         });
       });
@@ -285,57 +289,70 @@ describe('Visium QC Page', () => {
             .then(($slot) => {
               $slot.each((i, slotElement) => {
                 const classList = Array.from(slotElement.classList);
-                expect(classList).to.includes('bg-sdb-300');
+                expect(classList).includes('bg-sdb-300');
               });
             });
         });
       });
 
-      it('display text boxes to enter cq value for all slots with samples', () => {
-        cy.findByRole('table').within(() => {
-          cy.findAllByTestId('Cq value-input').should('have.length.above', 0);
-          cy.findAllByTestId('Cycles-input').should('have.length.above', 0);
-        });
-      });
       it('displays scan field as disabled', () => {
         cy.get('#labwareScanInput').should('be.disabled');
       });
-    });
-    context('When user enters a value in CQ value text box', () => {
-      before(() => {
-        cy.findByTestId('all-Cq value').type('5');
-      });
+
       it('shows cq value in all text fields in CQ column of table', () => {
-        cy.findAllByTestId('Cq value-input').should('have.value', 5);
+        cy.findByTestId('all-Cycles').type('3');
+        cy.findAllByTestId('Cycles-input').should('have.value', 3);
       });
     });
-    context('When user enters a value in Cycles text box', () => {
+
+    describe('When the scanned labware slots does not contain Cq values', () => {
       before(() => {
-        cy.findByTestId('all-Cycles').type('3');
+        cy.msw().then(({ worker, graphql }) => {
+          worker.use(
+            graphql.query<FindMeasurementByBarcodeAndNameQuery, FindMeasurementByBarcodeAndNameQueryVariables>(
+              'FindMeasurementByBarcodeAndName',
+              () => {
+                return HttpResponse.json({
+                  data: {
+                    measurementValueFromLabwareOrParent: []
+                  }
+                });
+              }
+            )
+          );
+        });
+        cy.reload();
+        selectOption('qcType', 'Amplification');
+        cy.get('#labwareScanInput').type('STAN-5100{enter}');
       });
-      it('shows cq value in all text fields in CQ column of table', () => {
-        cy.findAllByTestId('Cycles-input').should('have.value', 3);
+      it('displays error message', () => {
+        cy.findByText('No Cq values associated with the labware slots').should('be.visible');
+      });
+      it('hides Cycles table and input', () => {
+        cy.findByRole('table').should('not.exist');
+        cy.findByTestId('all-Cycles').should('not.exist');
+      });
+      it('displays the labware layout', () => {
+        cy.findByTestId('labware').should('be.visible');
       });
     });
 
     describe('On Save', () => {
+      before(() => {
+        cy.reload();
+        selectOption('qcType', 'Amplification');
+        cy.get('#labwareScanInput').type('STAN-5100{enter}');
+        cy.findByTestId('all-Cycles').type('3');
+      });
       it('Save button should be disabled when there is no SGP number', () => {
         selectSGPNumber('');
         cy.findByRole('button', { name: /Save/i }).should('be.disabled');
       });
-
-      context('When there is no server error', () => {
-        before(() => {
-          selectSGPNumber('SGP1008');
-          cy.findByRole('button', { name: /Save/i }).should('not.be.disabled').click();
-        });
-
-        it('shows a success message', () => {
-          cy.findByText('Amplification complete').should('be.visible');
-        });
-        after(() => {
-          cy.findByRole('button', { name: /Reset/i }).click();
-        });
+      it('shows a success message', () => {
+        selectSGPNumber('SGP1008');
+        cy.findByTestId('all-Cycles').type('4');
+        cy.findByRole('button', { name: /Save/i }).should('not.be.disabled').click();
+        cy.findByText('Amplification complete').should('be.visible');
       });
     });
   });
@@ -573,6 +590,77 @@ describe('Visium QC Page', () => {
     });
   });
 
+  describe('When selecting qPCR Results for QCType', () => {
+    before(() => {
+      cy.visit('/lab/visium_qc');
+      selectOption('qcType', 'qPCR results');
+      cy.get('#labwareScanInput').type('STAN-2100{enter}');
+    });
+
+    context('When a user enters a global CQ value', () => {
+      before(() => {
+        cy.findByTestId('all-Cq value').type('5');
+      });
+      it('updates all the Cq value inputs inside the table related to the slots', () => {
+        cy.findAllByTestId('Cq value-input').should('have.value', 5);
+      });
+    });
+
+    describe('On Save', () => {
+      it('Save button should be disabled when there is no SGP number', () => {
+        selectSGPNumber('');
+        cy.findByRole('button', { name: /Save/i }).should('be.disabled');
+      });
+
+      context('When there is no server error', () => {
+        before(() => {
+          selectSGPNumber('SGP1008');
+          cy.findByRole('button', { name: /Save/i }).should('not.be.disabled').click();
+        });
+
+        it('shows a success message', () => {
+          cy.findByText('qPCR results complete').should('be.visible');
+        });
+        after(() => {
+          cy.findByRole('button', { name: /Reset/i }).click();
+        });
+      });
+      context('With server failure', () => {
+        before(() => {
+          cy.msw().then(({ worker, graphql }) => {
+            worker.use(
+              graphql.mutation<RecordOpWithSlotMeasurementsMutation, RecordOpWithSlotMeasurementsMutationVariables>(
+                'RecordOpWithSlotMeasurements',
+                () => {
+                  return HttpResponse.json({
+                    errors: [
+                      {
+                        message: 'Exception while fetching data : The operation could not be validated.',
+                        extensions: {
+                          problems: ['Labware is discarded: [STAN-2100]']
+                        }
+                      }
+                    ]
+                  });
+                }
+              )
+            );
+          });
+          cy.reload();
+          selectSGPNumber('SGP1008');
+          selectOption('qcType', 'qPCR results');
+          cy.get('#labwareScanInput').type('STAN-2100{enter}');
+          cy.findByTestId('all-Cq value').type('5');
+          cy.findByRole('button', { name: /Save/i }).click();
+        });
+
+        it('shows an error', () => {
+          cy.findByText('Failed to record qPCR results').should('be.visible');
+        });
+      });
+    });
+  });
+
   function saveButton() {
     return cy.findByRole('button', { name: /Save/i });
   }