Update datahandling.py

fix for #70 and created #71 to handle follow up
ssi-dk · Sep 17, 2020 · 3515730 · 3515730
1 parent ed50ce7
commit 3515730
Showing 1 changed file with 6 additions and 5 deletions.
diff --git a/lib/bifrostlib/bifrostlib/datahandling.py b/lib/bifrostlib/bifrostlib/datahandling.py
@@ -373,11 +373,12 @@ def check_requirements(self, output_file="requirements_met", log=None):
                     expected_value = requirements[requirement]
                     if not self.requirement_met(self.sample_db, field, expected_value, log):
                         no_failures = False
-                elif category == "component":
-                    field = requirement.split(".")[2:]
-                    expected_value = requirements[requirement]
-                    s_c_db = get_sample_component(sample_id=self.sample_id,
-                                                  component_id=self.component_id)
+                    elif category == "component":
+                        component_to_check = requirement.split(".")[1]
+                        field = requirement.split(".")[2:]
+                        expected_value = requirements[requirement]
+                        s_c_db = get_sample_component(sample_id=self.sample_id,
+                                                  component_name=component_to_check)
                     if not self.requirement_met(s_c_db, field, expected_value, log):
                         no_failures = False
                 else: