Merge pull request #66 from uc-python/develop #79
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
name: Test | |
on: push | |
jobs: | |
validate-notebooks: | |
name: Validate Notebooks | |
runs-on: ubuntu-latest | |
defaults: | |
run: | |
# Required for "run" commands to execute in the conda env. | |
shell: bash -l {0} | |
steps: | |
- name: Checkout Code | |
uses: actions/checkout@v3 | |
- name: Set Up Conda Environment | |
uses: conda-incubator/setup-miniconda@v2 | |
with: | |
activate-environment: uc-python | |
environment-file: environment.yml | |
- name: Set Up Jupyter Kernel | |
run: | | |
python -m ipykernel install --user --name uc-python | |
- name: Install Papermill | |
run: | | |
conda install papermill | |
- name: Prep notebooks | |
run: | | |
# Remove nb cells that should be skipped in CI. | |
for nb in notebooks/*.ipynb; do | |
python scripts/prep_nb_for_ci.py "$nb" | |
done | |
- name: Run notebooks | |
run: | | |
for nb in notebooks/*.ipynb; do | |
echo "running $nb" | |
output=$(papermill --cwd notebooks/ "$nb" -) | |
done |