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pysindy-commit

pysindy-commit #1

Workflow file for this run

# Rerun experiments on new pysindy commits
# Only keep this file if you want to maintain your examples with future
# breaking changes in pysindy. If at some point you want to stop updating
# the example to keep up with breaking changes, pin the versions of all
# dependencies and delete this file. You may still make changes to the
# experiment afterwards.
name: pysindy-commit
# Ideally, this workflow would be triggered from each change to pysindy
# But not sure how to do that yet, so just run it every other week
# on: workflow_dispatch
on:
schedule:
# run twice a month during times when hopefully few other jobs are scheduled
- cron: '0 12 6,21 * *'
jobs:
find-notebooks:
runs-on: ubuntu-latest
outputs:
paths: ${{ steps.find-notebooks.outputs.paths }}
steps:
- name: List Files
id: find-notebooks
uses: mirko-felice/[email protected]
with:
repo: ${{ github.repository }}
ref: ${{ github.ref }}
path: "examples"
ext: ".ipynb"
run-notebooks:
runs-on: ubuntu-latest
needs: find-notebooks
strategy:
matrix:
files: ${{ fromJson(needs.find-notebooks.outputs.paths) }}
steps:
- uses: actions/checkout@v3
- name: "Set up Python"
uses: actions/setup-python@v3
with:
python-version: "3.10"
- name: Install dependencies
run: pip install -r examples/requirements.txt
- name: "Install most current pysindy"
run: pip install pysindy[sbr,cvxpy,miosr] @ git+https://github/dynamicslab/pysindy@master
- name: "Run notebooks"
run: |
jupyter nbconvert --execute --to notebook --inplace ${{ matrix.files }}