pysindy-commit #1
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# Rerun experiments on new pysindy commits | |
# Only keep this file if you want to maintain your examples with future | |
# breaking changes in pysindy. If at some point you want to stop updating | |
# the example to keep up with breaking changes, pin the versions of all | |
# dependencies and delete this file. You may still make changes to the | |
# experiment afterwards. | |
name: pysindy-commit | |
# Ideally, this workflow would be triggered from each change to pysindy | |
# But not sure how to do that yet, so just run it every other week | |
# on: workflow_dispatch | |
on: | |
schedule: | |
# run twice a month during times when hopefully few other jobs are scheduled | |
- cron: '0 12 6,21 * *' | |
jobs: | |
find-notebooks: | |
runs-on: ubuntu-latest | |
outputs: | |
paths: ${{ steps.find-notebooks.outputs.paths }} | |
steps: | |
- name: List Files | |
id: find-notebooks | |
uses: mirko-felice/[email protected] | |
with: | |
repo: ${{ github.repository }} | |
ref: ${{ github.ref }} | |
path: "examples" | |
ext: ".ipynb" | |
run-notebooks: | |
runs-on: ubuntu-latest | |
needs: find-notebooks | |
strategy: | |
matrix: | |
files: ${{ fromJson(needs.find-notebooks.outputs.paths) }} | |
steps: | |
- uses: actions/checkout@v3 | |
- name: "Set up Python" | |
uses: actions/setup-python@v3 | |
with: | |
python-version: "3.10" | |
- name: Install dependencies | |
run: pip install -r examples/requirements.txt | |
- name: "Install most current pysindy" | |
run: pip install pysindy[sbr,cvxpy,miosr] @ git+https://github/dynamicslab/pysindy@master | |
- name: "Run notebooks" | |
run: | | |
jupyter nbconvert --execute --to notebook --inplace ${{ matrix.files }} |