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Commits on May 19, 2023

• Update README.md

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  wbazant

  authoredMay 19, 2023
  342a21c

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Commits on Nov 23, 2022

• Improve readme

  wbazant

  committedNov 23, 2022
  a7fe0a2

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Commits on Apr 1, 2022

• Package for pip

  wbazant

  committedApr 1, 2022
  96ce05e

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Commits on Feb 10, 2022

• Add num_alignments as a filter and output field

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  wbazant

  committedFeb 10, 2022
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Commits on Dec 6, 2021

• x

  wbazant

  committedDec 6, 2021
  10e6be2

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Commits on Dec 3, 2021

• Improve the readme

  wbazant

  committedDec 3, 2021
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Commits on Dec 2, 2021

• Add filter description to the readme

  wbazant

  committedDec 2, 2021
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Commits on Dec 1, 2021

• Clean up the readme a bit

  wbazant

  committedDec 1, 2021
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Commits on Oct 12, 2021

• Daily snapshot

  wbazant

  committedOct 12, 2021
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Commits on Oct 11, 2021

• Readme snapshot

  wbazant

  committedOct 11, 2021
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Commits on Sep 13, 2021

• Filter the result on the output columns taxon_num_reads and taxon_num_markers

  wbazant

  committedSep 13, 2021
  d2b5b6e

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• Read / alignment based filters

  wbazant

  committedSep 13, 2021
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• One interface: marker_alignments

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  wbazant

  committedSep 13, 2021
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Commits on Aug 31, 2021

• Use log likelihoods for each possible cutoff

  wbazant

  committedAug 31, 2021
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Commits on Aug 26, 2021

• Model the noise through a beta binomial distribution

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  wbazant

  committedAug 26, 2021
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• Implement a noise model based on a binomial distribution

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  wbazant

  committedAug 26, 2021
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Commits on Aug 6, 2021

• Rename: taxon_id -> taxon

  wbazant

  committedAug 6, 2021
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Commits on Aug 5, 2021

• Update README.md

  wbazant

  authoredAug 5, 2021
  e01e1bb

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• Update README.md

  wbazant

  authoredAug 5, 2021
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Commits on Jul 27, 2021

• summarize_marker_alignments is a better script name. Also can't install on pip yet.

  wbazant

  committedJul 27, 2021
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Commits on Jul 23, 2021

• Make the EukProt regex more complicated and also give up on making it work fully correctly. Add lookup table.

  wbazant

  committedJul 23, 2021
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Commits on Jul 22, 2021

• Initial commit

  wbazant

  committedJul 22, 2021
  800346b

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