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16 Open 56 Closed
16 Open 56 Closed
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Issues list

Conda Package out of sr2silo
#141 opened Mar 6, 2025 by gordonkoehn
@gordonkoehn
feature: add option to pass protein database in nuc_to_aa_alignment avoid recombutation in parse_translate_align_in_batches enhancement New feature or request
#140 opened Mar 5, 2025 by gordonkoehn
2 tasks
@gordonkoehn
Refactor ReadMetadata handeling and allow Generic Data refactor test
#132 opened Mar 3, 2025 by gordonkoehn
@gordonkoehn
1
test: add orthogonal test with nextclade
#124 opened Feb 27, 2025 by gordonkoehn
@gordonkoehn
Explore Smart Sorting for Low Resource Conversion enhancement New feature or request
#119 opened Feb 26, 2025 by gordonkoehn
@gordonkoehn
1
bug: progress bar written in new line on EULER
#118 opened Feb 25, 2025 by gordonkoehn
test: validate single JSON from printed NDJSON
#116 opened Feb 25, 2025 by gordonkoehn
Add V-pipe workflow specific info on metadata to sr2silo
#113 opened Feb 25, 2025 by gordonkoehn
feature: Improve Performance of Read Processing And Translation enhancement New feature or request
#109 opened Feb 24, 2025 by gordonkoehn
@gordonkoehn
1
feature: source references enhancement New feature or request
#103 opened Feb 21, 2025 by gordonkoehn
@gordonkoehn
1
tests: add missing tests to sr2silo.process.convert
#93 opened Feb 18, 2025 by gordonkoehn
test: implement check if aligment of amino acid read is in the same region as on the DNA level test
#90 opened Feb 7, 2025 by gordonkoehn
Add Output verification to Start-to-End test test
#81 opened Jan 20, 2025 by gordonkoehn
@gordonkoehn
2
doc: start populating the docs documentation Improvements or additions to documentation
#77 opened Jan 10, 2025 by gordonkoehn
Read Pairing & Merge enhancement New feature or request question Further information is requested
#54 opened Dec 2, 2024 by gordonkoehn
1
@gordonkoehn
6
meta: sr2silo for Loculus Architecture epic Epic task / Overarching issue
#45 opened Nov 25, 2024 by gordonkoehn
4 tasks done
@gordonkoehn
4
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