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Windows Installation Instructions

John edited this page Nov 30, 2022 · 20 revisions

Run the DeepPhe Installer

  1. Download the DeepPhe Installer from the following URL: DeepPhe_windows.exe

  2. Run the file that you just downloaded: DeepPhe_windows.exe

Bypass Warnings

Since DeepPhe is niche software, it is not yet known to Microsoft. Therefore, when the installer is opened, you will see the following warning:

To bypass the warning, click "More Info". You can see that DeepPhe is digitally signed by the University of Pittsburgh and click "Run Anyway" to agree to start the installer.

Finally, you will be asked if you'd like to allow DeepPhe to make changes to your device. Click "Yes".

Continue installation

Once the installer runs and you've bypassed the warnings, follow the on screen prompts. You will be prompted to choose an installation directory for DeepPhe.

Verify Your installation

Once the installer completes, you should see the DeepPhe folder in your Program Files directory (or wherever you chose to install it).

The contents of the installation folder should look as follows:

After installation, we suggest that user read the Quickstart Guide for instructions on how to use DeepPhe.

Open the Pages section (above) to view all pages by title.

Mission

Installation
   Windows
   Mac
   Linux
   Known Issues

Quickstart
   Windows Quickstart Tutorial
   Mac Quickstart Tutorial
   Command line-execution

Using DeepPhe-XN With Your Own Files
   Input File Requirements
   Configuring DeepPhe Phenotype Summarizer
   Specifying and Interpreting Outputs

Example Files Description
   Using DeepPhe-XN Visualizer
   Additional Output File Types
   Example File Data Specifics

About the DeepPhe Pipeline
   Pipeline Description

Code Modules

Licensing
Funding
Contact / Help

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