tools_annotsv.cwl

Documentation for annotsv.cwl

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Docker Requirement

mgibio/annotsv-cwl:2.1

Inputs

Name	Label	Description	Type	Secondary Files
genome_build			string
input_vcf		vcf file to filter	File
output_tsv_name		output file name	string?
snps_vcf		snps vcf(s) for adding hom/het snp counts found within svs	File[]?

Outputs

Name	Label	Description	Type	Secondary Files
sv_variants_tsv			File