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tools_filter_vcf_depth.cwl

Travis CI User edited this page Feb 4, 2020 · 3 revisions

Documentation for filter_vcf_depth.cwl

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Overview

filter variants at sites below a given sequence depth in each sample

Docker Requirement

mgibio/depth-filter:0.1.2

Inputs

Name Label Description Type Secondary Files
vcf File
minimum_depth int
sample_names string[]

Outputs

Name Label Description Type Secondary Files
depth_filtered_vcf File
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