tools_variants_to_table.cwl

Documentation for variants_to_table.cwl

This page is auto-generated. Do not edit.

Overview

SelectVariants (GATK 4.1.8.1)

Docker Requirement

broadinstitute/gatk:4.1.8.1

Inputs

Name	Label	Description	Type	Secondary Files
reference			['string', 'File']	['.fai', '^.dict']
vcf			File	['.tbi']
fields			{'type': 'array', 'items': 'string', 'inputBinding': {'prefix': '-F'}}
genotype_fields			{'type': 'array', 'items': 'string', 'inputBinding': {'prefix': '-GF'}}

Outputs

Name	Label	Description	Type	Secondary Files
variants_tsv			File