tools_combine_gvcfs.cwl

Documentation for combine_gvcfs.cwl

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Overview

GATK CombineGVCFs

Docker Requirement

broadinstitute/gatk:4.1.8.1

Inputs

Name	Label	Description	Type	Secondary Files
reference			['string', 'File']	['.fai', '^.dict']
gvcfs			{'type': 'array', 'items': 'File', 'inputBinding': {'prefix': '--variant'}}
output_file_name			string

Outputs

Name	Label	Description	Type	Secondary Files
gvcf			File	['.tbi']