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HIST1H3B

rdmorin edited this page Jun 20, 2024 · 18 revisions

bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true

HIST1H3B

History

%%{init: { 'logLevel': 'debug', 'theme': 'dark' } }%%
timeline
    title Publication timing
      2013-01-01 : Zhang : DLBCL
      2015-02-12 : Reichel : PMBL
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Relevance tier by entity

Entity Tier Description
PMBL 2 relevance in PMBL/cHL/GZL not firmly established[@reichelFlowSortingExome2015a]
DLBCL 1 high-confidence DLBCL gene[@lohrDiscoveryPrioritizationSomatic2012a]
FL 1 high-confidence FL gene

Mutation incidence in large patient cohorts (GAMBL reanalysis)

Entity source frequency (%)
DLBCL GAMBL genomes 2.10
DLBCL Schmitz cohort 1.70
DLBCL Reddy cohort 2.00
DLBCL Chapuy cohort 2.14
FL GAMBL genomes 1.62

Mutation pattern and selective pressure estimates

Entity aSHM Significant selection dN/dS (missense) dN/dS (nonsense)
BL No No 8.244 0.000
DLBCL No No 2.108 9.678
FL No No 1.637 0.000

HIST1H3B Hotspots

Chromosome Coordinate (hg19) ref>alt HGVSp
chr6 26032045 C>T D82N
chr6 26032029 C>G S87T
chr6 26032029 C>T S87N
chr6 26032028 G>C S87R
chr6 26032021 C>T V90M
chr6 26032017 A>G M91T

View coding variants in ProteinPaint hg19 or hg38

View all variants in GenomePaint hg19 or hg38

References

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