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rdmorin edited this page Jun 21, 2024 · 17 revisions

bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true

P2RY8

P2RY8 encodes a G protein–coupled receptor that is expressed on germinal center B cells. Signals through this receptor promote confinement of B cells to the GC niche.1 Downstream signaling through Galpha13 (encoded by GNA13) and S1PR2 is distrupted by mutations of one of these genes in GC lymphomas including the GCB subgroup of DLBCL2 and BL.1

History

%%{init: { 'logLevel': 'debug', 'theme': 'dark' } }%%
timeline
    title Publication timing
      2012-03-06 : Lohr : DLBCL
      2014-12-11 : Muppidi : BL
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Relevance tier by entity

Entity Tier Description
PMBL 1 high-confidence PMBL/cHL/GZL gene
BL 1 high-confidence BL gene [@muppidiLossSignalingGa132014b]
DLBCL 1 high-confidence DLBCL gene [@lohrDiscoveryPrioritizationSomatic2012a]
FL 2 relevance in FL not firmly established

Mutation incidence in large patient cohorts (GAMBL reanalysis)

Entity source frequency (%)
BL GAMBL genomes+capture 6.93
BL Thomas cohort 11.00
BL Panea cohort NA
DLBCL GAMBL genomes 6.88
DLBCL Schmitz cohort 7.23
DLBCL Reddy cohort NA
DLBCL Chapuy cohort 5.98
FL GAMBL genomes 2.31

Mutation pattern and selective pressure estimates

Entity aSHM Significant selection dN/dS (missense) dN/dS (nonsense)
BL No Yes 58.153 189.145
DLBCL No Yes 31.041 0.000
FL No No 23.117 0.000

View coding variants in ProteinPaint hg19 or hg38

View all variants in GenomePaint hg19 or hg38

P2RY8 Expression

References

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