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Xolotl is an open-source, high performance plasma-surface interactions simulator that is under development within the DOE's SciDAC program (DOE CODE page). It can also model other irradiated material like nuclear fuel in fission reactors.
Here are some of the pages that may be of interest to you:
Build Configuration
Running Xolotl
Parameter File
PETSc Options
Benchmark Problems
Data Analysis
Guidelines
Code Quirks (for contributors)
Publications
The wiki uses Markdown syntax.
October 2013 Morning Status Meetings
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